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wrap53 WD repeat containing, antisense to TP53 [ Pundamilia nyererei ]

Gene ID: 102207190, updated on 10-Mar-2024

Summary

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Gene symbol
wrap53
Gene description
WD repeat containing, antisense to TP53
See related
Ensembl:ENSPNYG00000001129
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187614.1 (131653..144786)

NW_005187614.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106456428 Neighboring gene GRB10 interacting GYF protein 1a Neighboring gene ephrin-B3b Neighboring gene serine (or cysteine) peptidase inhibitor, clade H, member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187614.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Cajal body organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Cajal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
telomerase Cajal body protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187614.1 Reference PunNye1.0

    Range
    131653..144786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005748093.1 → XP_005748150.1  telomerase Cajal body protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005748150.1

    UniProtKB/TrEMBL
    A0A3B4ETJ1
    Conserved Domains (3) summary
    COG2319
    Location:131 → 443
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:174 → 218
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:145 → 440
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_005748095.1 → XP_005748152.1  telomerase Cajal body protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A9Y3VT83
    Conserved Domains (3) summary
    COG2319
    Location:129 → 441
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:172 → 216
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:143 → 438
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_005748094.1 → XP_005748151.1  telomerase Cajal body protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005748151.1

    UniProtKB/TrEMBL
    A0A3B4ETJ1
    Related
    ENSPNYP00000001390.1, ENSPNYT00000001414.1
    Conserved Domains (3) summary
    COG2319
    Location:131 → 443
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:174 → 218
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:145 → 440
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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