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loxl2b lysyl oxidase-like 2b [ Pundamilia nyererei ]

Gene ID: 102198851, updated on 10-Mar-2024

Summary

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Gene symbol
loxl2b
Gene description
lysyl oxidase-like 2b
See related
Ensembl:ENSPNYG00000006056
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Also known as
loxl2
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187618.1 (443856..492849)

NW_005187618.1Genomic Context describing neighboring genes Neighboring gene hematopoietic death receptor Neighboring gene cytochrome b ascorbate-dependent protein 3 Neighboring gene golgin subfamily A member 7-like Neighboring gene secreted frizzled-related protein 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187618.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-lysine 6-oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysyl oxidase homolog 2
Names
lysyl oxidase like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187618.1 Reference PunNye1.0

    Range
    443856..492849
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005748237.1 → XP_005748294.1  lysyl oxidase homolog 2

    UniProtKB/TrEMBL
    A0A3B4FE37
    Related
    ENSPNYP00000007949.1, ENSPNYT00000008145.1
    Conserved Domains (3) summary
    smart00202
    Location:56 → 157
    SR; Scavenger receptor Cys-rich
    pfam00530
    Location:65 → 157
    SRCR; Scavenger receptor cysteine-rich domain
    pfam01186
    Location:544 → 738
    Lysyl_oxidase; Lysyl oxidase
Nucleotide Protein
Heading Accession and Version

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