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c5 complement component 5 [ Pundamilia nyererei ]

Gene ID: 102197350, updated on 10-Mar-2024

Summary

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Gene symbol
c5
Gene description
complement component 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187639.1 (269332..292549, complement)

NW_005187639.1Genomic Context describing neighboring genes Neighboring gene TELO2 interacting protein 2 Neighboring gene complement C5-like Neighboring gene PR domain zinc finger protein 12-like Neighboring gene far upstream element-binding protein 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187639.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
complement C5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187639.1 Reference PunNye1.0

    Range
    269332..292549 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013914934.1 → XP_013770388.1  complement C5

    UniProtKB/TrEMBL
    A0A3B4G764, A0A9Y6JKD8
    Conserved Domains (7) summary
    COG2373
    Location:117 → 1133
    YfaS; Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only]
    pfam00207
    Location:781 → 869
    A2M; Alpha-2-macroglobulin family
    pfam01821
    Location:699 → 745
    ANATO; Anaphylotoxin-like domain
    pfam01835
    Location:125 → 220
    A2M_N; MG2 domain
    pfam07678
    Location:1063 → 1316
    A2M_comp; A-macroglobulin complement component
    pfam07703
    Location:478 → 613
    A2M_N_2; Alpha-2-macroglobulin family N-terminal region
    cl08267
    Location:1005 → 1315
    ISOPREN_C2_like; This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate ...
Nucleotide Protein
Heading Accession and Version

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