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bcas3 BCAS3 microtubule associated cell migration factor [ Pundamilia nyererei ]

Gene ID: 102192965, updated on 10-Mar-2024

Summary

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Gene symbol
bcas3
Gene description
BCAS3 microtubule associated cell migration factor
See related
Ensembl:ENSPNYG00000023651
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187739.1 (21376..324205)

NW_005187739.1Genomic Context describing neighboring genes Neighboring gene signal sequence receptor, beta Neighboring gene uncharacterized LOC102194513 Neighboring gene T-box transcription factor 2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187739.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
breast carcinoma-amplified sequence 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187739.1 Reference PunNye1.0

    Range
    21376..324205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005752005.1 → XP_005752062.1  breast carcinoma-amplified sequence 3 isoform X1

    See identical proteins and their annotated locations for XP_005752062.1

    UniProtKB/TrEMBL
    A0A3B4HC26, A0A9Y3VU07
    Conserved Domains (3) summary
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    pfam12490
    Location:538 → 769
    BCAS3; Breast carcinoma amplified sequence 3
    cl25539
    Location:333 → 428
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_005752007.1 → XP_005752064.1  breast carcinoma-amplified sequence 3 isoform X2

    See identical proteins and their annotated locations for XP_005752064.1

    UniProtKB/TrEMBL
    A0A3B4H6C8, A0A3B4HC26
    Related
    ENSPNYP00000031367.1, ENSPNYT00000032120.1
    Conserved Domains (3) summary
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    pfam12490
    Location:538 → 754
    BCAS3; Breast carcinoma amplified sequence 3
    cl25539
    Location:333 → 428
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_005752009.2 → XP_005752066.1  breast carcinoma-amplified sequence 3 isoform X3

    See identical proteins and their annotated locations for XP_005752066.1

    UniProtKB/TrEMBL
    A0A3B4HC26, A0A9Y3VZI0
    Related
    ENSPNYP00000031369.1, ENSPNYT00000032122.1
    Conserved Domains (3) summary
    pfam12490
    Location:538 → 769
    BCAS3; Breast carcinoma amplified sequence 3
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:333 → 428
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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