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gja1b gap junction protein alpha 1b [ Pundamilia nyererei ]

Gene ID: 102192756, updated on 10-Mar-2024

Summary

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Gene symbol
gja1b
Gene description
gap junction protein alpha 1b
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Also known as
cx43; gja1
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187605.1 (1057696..1062410, complement)

NW_005187605.1Genomic Context describing neighboring genes Neighboring gene serine incorporator 1 Neighboring gene heat shock transcription factor 2 Neighboring gene gap junction Cx32.2 protein-like Neighboring gene minichromosome maintenance 9 homologous recombination repair factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187605.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of connexin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gap junction alpha-1 protein
Names
connexin 43
gap junction protein alpha 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187605.1 Reference PunNye1.0

    Range
    1057696..1062410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005747791.1 → XP_005747848.1  gap junction alpha-1 protein

    See identical proteins and their annotated locations for XP_005747848.1

    UniProtKB/TrEMBL
    A0A9Y3RQN3
    Conserved Domains (2) summary
    pfam00029
    Location:3 → 233
    Connexin
    pfam03508
    Location:295 → 314
    Connexin43; Gap junction alpha-1 protein (Cx43)
Nucleotide Protein
Heading Accession and Version

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