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GJB1 gap junction protein beta 1 [ Capra hircus (goat) ]

Gene ID: 102190947, updated on 10-Mar-2024

Summary

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Gene symbol
GJB1
Gene description
gap junction protein beta 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See GJB1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) X Unlocalized Scaffold NW_017189516.1 (10544082..10551178, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) X NC_022322.1 (72077052..72084146, complement)

NW_017189516.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene uncharacterized LOC102188837 Neighboring gene high mobility group protein B1 pseudogene Neighboring gene heterogeneous nuclear ribonucleoprotein F-like Neighboring gene neuroligin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of connexin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gap junction beta-1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NW_017189516.1 Reference ASM170441v1 Primary Assembly

    Range
    10544082..10551178 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005700676.2 → XP_005700733.1  gap junction beta-1 protein

    See identical proteins and their annotated locations for XP_005700733.1

    UniProtKB/TrEMBL
    A0A452DV53, A0A8C2PHU5
    Conserved Domains (1) summary
    pfam00029
    Location:2 → 214
    Connexin

  2. XM_005700671.3 → XP_005700728.1  gap junction beta-1 protein

    See identical proteins and their annotated locations for XP_005700728.1

    UniProtKB/TrEMBL
    A0A452DV53, A0A8C2PHU5
    Conserved Domains (1) summary
    pfam00029
    Location:2 → 214
    Connexin
Nucleotide Protein
Heading Accession and Version

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