U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MSX1 msh homeobox 1 [ Capra hircus (goat) ]

Gene ID: 102190677, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
MSX1
Gene description
msh homeobox 1
See related
EnsemblRapid:ENSCHIG00000033497
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 6 NC_030813.1 (104583178..104587459, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 6 NC_022298.1 (101359510..101360173, complement)

Chromosome 6 - NC_030813.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 32B Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene cytokine like 1 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene syntaxin 18 Neighboring gene neuronal vesicle trafficking associated 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The function of Msx1 gene in promoting meiosis of dairy goat male germline stem cells (mGSCs). Mu H, et al. Cell Biochem Funct, 2013 Dec. PMID 24123057

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The results showed that Msx1 could enhance the expression of Stra8 and Scp3 and promote the meiosis in goat testicular cells.
    Title: The function of Msx1 gene in promoting meiosis of dairy goat male germline stem cells (mGSCs).
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
homeobox protein MSX-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030813.1 Reference ASM170441v1 Primary Assembly

    Range
    104583178..104587459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018049722.1 → XP_017905211.1  homeobox protein MSX-1

    UniProtKB/TrEMBL
    A0A452EK01
    Related
    ENSCHIP00000039641.1, ENSCHIT00000051694.1
    Conserved Domains (2) summary
    PTZ00449
    Location:99 → 248
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    pfam00046
    Location:175 → 229
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.