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RNF213 ring finger protein 213 [ Capra hircus (goat) ]

Gene ID: 102174427, updated on 10-Mar-2024

Summary

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Gene symbol
RNF213
Gene description
ring finger protein 213
See related
EnsemblRapid:ENSCHIG00000017136
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
69
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 19 NC_030826.1 (51484452..51608531, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 19 NC_022311.1 (51051105..51174477, complement)

Chromosome 19 - NC_030826.1Genomic Context describing neighboring genes Neighboring gene neuronal pentraxin 1 Neighboring gene endonuclease V Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene solute carrier family 26 member 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF213

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030826.1 Reference ASM170441v1 Primary Assembly

    Range
    51484452..51608531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013972340.2 → XP_013827794.2  E3 ubiquitin-protein ligase RNF213 isoform X1

    UniProtKB/TrEMBL
    A0A452EYY6

  2. XM_013972342.2 → XP_013827796.2  E3 ubiquitin-protein ligase RNF213 isoform X3

    UniProtKB/TrEMBL
    A0A452EYY6
    Related
    ENSCHIP00000017277.2, ENSCHIT00000025086.2

  3. XM_013972341.2 → XP_013827795.2  E3 ubiquitin-protein ligase RNF213 isoform X2

    UniProtKB/TrEMBL
    A0A452EYY6
    Related
    ENSCHIP00000046028.1, ENSCHIT00000042049.1
Nucleotide Protein
Heading Accession and Version

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