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SEMA5B semaphorin 5B [ Capra hircus (goat) ]

Gene ID: 102173041, updated on 10-Mar-2024

Summary

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Gene symbol
SEMA5B
Gene description
semaphorin 5B
See related
EnsemblRapid:ENSCHIG00000021175
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
22
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 1 NC_030808.1 (66898764..67100710, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 1 NC_022293.1 (65734786..65870542, complement)

Chromosome 1 - NC_030808.1Genomic Context describing neighboring genes Neighboring gene HSPB1 associated protein 1 Neighboring gene solute carrier family 49 member 4 Neighboring gene protein disulfide isomerase family A member 5 Neighboring gene SEC22 homolog A, vesicle trafficking protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-5B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030808.1 Reference ASM170441v1 Primary Assembly

    Range
    66898764..67100710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018045697.1 → XP_017901186.1  semaphorin-5B isoform X2

    UniProtKB/TrEMBL
    A0A452FHA6

  2. XM_018045703.1 → XP_017901192.1  semaphorin-5B isoform X3

    UniProtKB/TrEMBL
    A0A452FHA6

  3. XM_018045693.1 → XP_017901182.1  semaphorin-5B isoform X1

    UniProtKB/TrEMBL
    A0A452FHA6
    Related
    ENSCHIP00000023728.2, ENSCHIT00000031588.2
Nucleotide Protein
Heading Accession and Version

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