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NHLH1 nescient helix-loop-helix 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102140419, updated on 10-Mar-2024

Summary

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Gene symbol
NHLH1
Gene description
nescient helix-loop-helix 1
See related
Ensembl:ENSMFAG00000004384
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
102 current MFA1912RKSv2 (GCF_012559485.2) 1 NC_052255.1 (89276862..89290544, complement)
101 previous assembly Macaca_fascicularis_5.0 (GCF_000364345.1) 1 NC_022272.1 (91294343..91300079, complement)

Chromosome 1 - NC_052255.1Genomic Context describing neighboring genes Neighboring gene VANGL planar cell polarity protein 2 Neighboring gene U4 spliceosomal RNA Neighboring gene nicastrin Neighboring gene COPI coat complex subunit alpha Neighboring gene peroxisomal biogenesis factor 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helix-loop-helix protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca fascicularis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MFA1912RKSv2 Primary Assembly

Genomic

  1. NC_052255.1 Reference MFA1912RKSv2 Primary Assembly

    Range
    89276862..89290544 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045369048.1 → XP_045224983.1  helix-loop-helix protein 1

    UniProtKB/TrEMBL
    A0A2K5UBZ4
    Conserved Domains (1) summary
    cd19701
    Location:61 → 132
    bHLH_TS_HEN1; basic helix-loop-helix (bHLH) domain found in helix-loop-helix protein 1 (HEN-1) and similar proteins

  2. XM_005541255.3 → XP_005541312.1  helix-loop-helix protein 1

    See identical proteins and their annotated locations for XP_005541312.1

    UniProtKB/TrEMBL
    A0A2K5UBZ4
    Related
    ENSMFAP00000009887.1
    Conserved Domains (1) summary
    cd19701
    Location:61 → 132
    bHLH_TS_HEN1; basic helix-loop-helix (bHLH) domain found in helix-loop-helix protein 1 (HEN-1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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