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HIVEP3 HIVEP zinc finger 3 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102132340, updated on 10-Mar-2024

Summary

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Gene symbol
HIVEP3
Gene description
HIVEP zinc finger 3
See related
Ensembl:ENSMFAG00000041340
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
102 current MFA1912RKSv2 (GCF_012559485.2) 1 NC_052255.1 (181144897..181688007)
101 previous assembly Macaca_fascicularis_5.0 (GCF_000364345.1) 1 NC_022272.1 (185650269..186194645)

Chromosome 1 - NC_052255.1Genomic Context describing neighboring genes Neighboring gene guanylate cyclase activator 2B Neighboring gene heterogeneous nuclear ribonucleoprotein F-like Neighboring gene uncharacterized LOC123569139 Neighboring gene endothelin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor HIVEP3
Names
human immunodeficiency virus type I enhancer binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca fascicularis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MFA1912RKSv2 Primary Assembly

Genomic

  1. NC_052255.1 Reference MFA1912RKSv2 Primary Assembly

    Range
    181144897..181688007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015437609.2 → XP_015293095.2  transcription factor HIVEP3 isoform X1

    Conserved Domains (6) summary
    smart00451
    Location:1779 → 1812
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1875 → 2400
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:194 → 214
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1756 → 1776
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1754 → 1776
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:207 → 231
    zf-H2C2_2; Zinc-finger double domain

  2. XM_005543762.3 → XP_005543819.2  transcription factor HIVEP3 isoform X1

    Conserved Domains (6) summary
    smart00451
    Location:1779 → 1812
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1875 → 2400
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:194 → 214
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1756 → 1776
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1754 → 1776
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:207 → 231
    zf-H2C2_2; Zinc-finger double domain

  3. XM_015437619.2 → XP_015293105.2  transcription factor HIVEP3 isoform X2

  4. XM_045386681.1 → XP_045242616.1  transcription factor HIVEP3 isoform X1

    Conserved Domains (6) summary
    smart00451
    Location:1779 → 1812
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1875 → 2400
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:194 → 214
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1756 → 1776
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1754 → 1776
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:207 → 231
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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