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AMIGO2 adhesion molecule with Ig like domain 2 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102124161, updated on 10-Mar-2024

Summary

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Gene symbol
AMIGO2
Gene description
adhesion molecule with Ig like domain 2
See related
Ensembl:ENSMFAG00000036236
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
AMIGO-2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
102 current MFA1912RKSv2 (GCF_012559485.2) 11 NC_052265.1 (43783278..43786665, complement)
101 previous assembly Macaca_fascicularis_5.0 (GCF_000364345.1) 11 NC_022282.1 (45771474..45774959, complement)

Chromosome 11 - NC_052265.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123567497 Neighboring gene solute carrier family 38 member 4 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like Neighboring gene interferon-induced transmembrane protein 3-like Neighboring gene PC-esterase domain containing 1B Neighboring gene uncharacterized LOC107126693

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amphoterin-induced protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca fascicularis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MFA1912RKSv2 Primary Assembly

Genomic

  1. NC_052265.1 Reference MFA1912RKSv2 Primary Assembly

    Range
    43783278..43786665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005570654.2 → XP_005570711.1  amphoterin-induced protein 2

    See identical proteins and their annotated locations for XP_005570711.1

    UniProtKB/TrEMBL
    A0A2K5UBQ5, A0A8J8XCC5, G7PHN7
    Conserved Domains (5) summary
    smart00410
    Location:297 → 379
    IG_like; Immunoglobulin like
    COG4886
    Location:53 → 239
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:50 → 71
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:93 → 174
    LRR_8; Leucine rich repeat
    cl15307
    Location:227 → 282
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

  2. XM_015430818.2 → XP_015286304.1  amphoterin-induced protein 2

    UniProtKB/TrEMBL
    A0A2K5UBQ5, A0A8J8XCC5, G7PHN7
    Related
    ENSMFAP00000009792.1
    Conserved Domains (5) summary
    smart00410
    Location:297 → 379
    IG_like; Immunoglobulin like
    COG4886
    Location:53 → 239
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:50 → 71
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:93 → 174
    LRR_8; Leucine rich repeat
    cl15307
    Location:227 → 282
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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