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SUPT20H SPT20 homolog, SAGA complex component [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102113538, updated on 10-Mar-2024

Summary

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Gene symbol
SUPT20H
Gene description
SPT20 homolog, SAGA complex component
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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See SUPT20H in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087554.1 (19853355..19883346, complement)

NW_005087554.1Genomic Context describing neighboring genes Neighboring gene SMAD family member 9 Neighboring gene ALG5 dolichyl-phosphate beta-glucosyltransferase Neighboring gene exosome component 8 Neighboring gene periostin Neighboring gene transient receptor potential cation channel subfamily C member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087554.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor SPT20 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087554.1 Reference PseHum1.0 Primary Assembly

    Range
    19853355..19883346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014249135.1 → XP_014104610.1  transcription factor SPT20 homolog isoform X2

    Conserved Domains (1) summary
    pfam12090
    Location:68 → 230
    Spt20; Spt20 family

  2. XM_014249130.1 → XP_014104605.1  transcription factor SPT20 homolog isoform X1

    Conserved Domains (1) summary
    pfam12090
    Location:69 → 231
    Spt20; Spt20 family
Nucleotide Protein
Heading Accession and Version

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