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ATP9B ATPase phospholipid transporting 9B (putative) [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102113319, updated on 10-Mar-2024

Summary

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Gene symbol
ATP9B
Gene description
ATPase phospholipid transporting 9B (putative)
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087577.1 (1992447..2147827, complement)

NW_005087577.1Genomic Context describing neighboring genes Neighboring gene CTD phosphatase subunit 1 Neighboring gene nuclear factor of activated T cells 1 Neighboring gene spalt like transcription factor 3 Neighboring gene KIAA0319 ortholog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087577.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable phospholipid-transporting ATPase IIB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087577.1 Reference PseHum1.0 Primary Assembly

    Range
    1992447..2147827 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014254568.1 → XP_014110043.1  probable phospholipid-transporting ATPase IIB isoform X3

    Conserved Domains (6) summary
    cd01427
    Location:705 → 855
    HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
    TIGR01652
    Location:122 → 1109
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
    pfam00122
    Location:178 → 418
    E1-E2_ATPase; E1-E2 ATPase
    pfam13246
    Location:563 → 652
    Cation_ATPase; Cation transport ATPase (P-type)
    pfam16209
    Location:116 → 173
    PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
    pfam16212
    Location:864 → 1103
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal

  2. XM_014254567.1 → XP_014110042.1  probable phospholipid-transporting ATPase IIB isoform X2

    Conserved Domains (6) summary
    cd01427
    Location:733 → 883
    HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
    TIGR01652
    Location:122 → 1126
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
    pfam00122
    Location:178 → 418
    E1-E2_ATPase; E1-E2 ATPase
    pfam13246
    Location:563 → 652
    Cation_ATPase; Cation transport ATPase (P-type)
    pfam16209
    Location:116 → 173
    PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
    pfam16212
    Location:892 → 1120
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal

  3. XM_005525241.2 → XP_005525298.2  probable phospholipid-transporting ATPase IIB isoform X1

    Conserved Domains (6) summary
    cd01427
    Location:733 → 883
    HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
    TIGR01652
    Location:122 → 1137
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
    pfam00122
    Location:178 → 418
    E1-E2_ATPase; E1-E2 ATPase
    pfam13246
    Location:563 → 652
    Cation_ATPase; Cation transport ATPase (P-type)
    pfam16209
    Location:116 → 173
    PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
    pfam16212
    Location:892 → 1131
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
Nucleotide Protein
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