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DERL1 derlin 1 [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102112529, updated on 10-Mar-2024

Summary

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Gene symbol
DERL1
Gene description
derlin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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See DERL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087555.1 (10727877..10743858)

NW_005087555.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C8orf76 homolog Neighboring gene family with sequence similarity 83 member A Neighboring gene TBC1 domain family member 31 Neighboring gene zinc fingers and homeoboxes 2 Neighboring gene hyaluronan synthase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087555.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables misfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-specific protease binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Hrd1p ubiquitin ligase ERAD-L complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
derlin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087555.1 Reference PseHum1.0 Primary Assembly

    Range
    10727877..10743858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005516929.2 → XP_005516986.1  derlin-1

    See identical proteins and their annotated locations for XP_005516986.1

    Conserved Domains (1) summary
    pfam04511
    Location:11 → 204
    DER1; Der1-like family
Nucleotide Protein
Heading Accession and Version

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