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SFMBT1 Scm like with four mbt domains 1 [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102111386, updated on 10-Mar-2024

Summary

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Gene symbol
SFMBT1
Gene description
Scm like with four mbt domains 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087566.1 (15220584..15291828, complement)

NW_005087566.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 110 Neighboring gene musculoskeletal, embryonic nuclear protein 1 Neighboring gene RFT1 homolog Neighboring gene protein kinase C delta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087566.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scm-like with four MBT domains protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087566.1 Reference PseHum1.0 Primary Assembly

    Range
    15220584..15291828 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005522172.2 → XP_005522229.1  scm-like with four MBT domains protein 1

    Conserved Domains (4) summary
    cd09581
    Location:783 → 867
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00454
    Location:794 → 858
    SAM; Sterile alpha motif
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam12140
    Location:503 → 618
    DUF3588; Protein of unknown function (DUF3588)
Nucleotide Protein
Heading Accession and Version

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