U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

APP amyloid beta precursor protein [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102108517, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
APP
Gene description
amyloid beta precursor protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See APP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087573.1 (12850918..13094296)

NW_005087573.1Genomic Context describing neighboring genes Neighboring gene microtubule associated protein 6 Neighboring gene somatotropin-like Neighboring gene GA binding protein transcription factor subunit alpha Neighboring gene ATP synthase peripheral stalk subunit F6

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005087573.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transition metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
amyloid beta A4 protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087573.1 Reference PseHum1.0 Primary Assembly

    Range
    12850918..13094296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005524152.1 → XP_005524209.1  amyloid beta A4 protein

    Conserved Domains (7) summary
    smart00006
    Location:24 → 188
    A4_EXTRA; amyloid A4
    pfam00014
    Location:295 → 343
    Kunitz_BPTI; Kunitz/Bovine pancreatic trypsin inhibitor domain
    pfam02177
    Location:31 → 131
    APP_N; Amyloid A4 N-terminal heparin-binding
    pfam03494
    Location:657 → 695
    Beta-APP; Beta-amyloid peptide (beta-APP)
    pfam10515
    Location:698 → 748
    APP_amyloid; beta-amyloid precursor protein C-terminus
    pfam12924
    Location:133 → 188
    APP_Cu_bd; Copper-binding of amyloid precursor, CuBD
    pfam12925
    Location:348 → 530
    APP_E2; E2 domain of amyloid precursor protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.