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COPE COPI coat complex subunit epsilon [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102107860, updated on 10-Mar-2024

Summary

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Gene symbol
COPE
Gene description
COPI coat complex subunit epsilon
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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See COPE in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087651.1 (1461942..1473335, complement)

NW_005087651.1Genomic Context describing neighboring genes Neighboring gene growth differentiation factor 1 Neighboring gene ceramide synthase 1 Neighboring gene DEAD-box helicase 49 Neighboring gene homer scaffold protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087651.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPI vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coatomer subunit epsilon
Names
coatomer protein complex subunit epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087651.1 Reference PseHum1.0 Primary Assembly

    Range
    1461942..1473335 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014260298.1 → XP_014115773.1  coatomer subunit epsilon

    Conserved Domains (2) summary
    pfam04733
    Location:14 → 301
    Coatomer_E; Coatomer epsilon subunit
    sd00004
    Location:149 → 172
    PPR; PPR repeat [structural motif]

  2. XM_014260299.1 → XP_014115774.1  coatomer subunit epsilon

    Conserved Domains (2) summary
    pfam04733
    Location:14 → 301
    Coatomer_E; Coatomer epsilon subunit
    sd00004
    Location:149 → 172
    PPR; PPR repeat [structural motif]

  3. XM_005531666.2 → XP_005531723.1  coatomer subunit epsilon

    Conserved Domains (2) summary
    pfam04733
    Location:14 → 301
    Coatomer_E; Coatomer epsilon subunit
    sd00004
    Location:149 → 172
    PPR; PPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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