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HMBOX1 homeobox containing 1 [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102104414, updated on 10-Mar-2024

Summary

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Gene symbol
HMBOX1
Gene description
homeobox containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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See HMBOX1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087605.1 (3727807..3834012, complement)

NW_005087605.1Genomic Context describing neighboring genes Neighboring gene methionine sulfoxide reductase A Neighboring gene kinesin family member 13B Neighboring gene integrator complex subunit 9 Neighboring gene exostosin like glycosyltransferase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087605.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087605.1 Reference PseHum1.0 Primary Assembly

    Range
    3727807..3834012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014257643.1 → XP_014113118.1  homeobox-containing protein 1 isoform X2

    Conserved Domains (2) summary
    cd00086
    Location:269 → 341
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam04814
    Location:25 → 228
    HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus

  2. XM_014257642.1 → XP_014113117.1  homeobox-containing protein 1 isoform X1

    Conserved Domains (2) summary
    cd00086
    Location:269 → 341
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam04814
    Location:25 → 228
    HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
Nucleotide Protein
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