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CLINT1 clathrin interactor 1 [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102104213, updated on 10-Mar-2024

Summary

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Gene symbol
CLINT1
Gene description
clathrin interactor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087571.1 (11237878..11285011, complement)

NW_005087571.1Genomic Context describing neighboring genes Neighboring gene tRNA-histidine guanylyltransferase 1 like Neighboring gene LSM11, U7 small nuclear RNA associated Neighboring gene EBF transcription factor 1 Neighboring gene ring finger protein 145

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087571.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
clathrin interactor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087571.1 Reference PseHum1.0 Primary Assembly

    Range
    11237878..11285011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005523620.2 → XP_005523677.1  clathrin interactor 1 isoform X1

    Conserved Domains (2) summary
    cd03571
    Location:23 → 146
    ENTH_epsin; ENTH domain, Epsin family; The epsin (Eps15 interactor) N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated ...
    pfam13634
    Location:336 → 422
    Nucleoporin_FG; Nucleoporin FG repeat region

  2. XM_014253224.1 → XP_014108699.1  clathrin interactor 1 isoform X2

    Conserved Domains (2) summary
    cd03571
    Location:5 → 128
    ENTH_epsin; ENTH domain, Epsin family; The epsin (Eps15 interactor) N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated ...
    pfam13634
    Location:318 → 404
    Nucleoporin_FG; Nucleoporin FG repeat region
Nucleotide Protein
Heading Accession and Version

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