U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LSAMP limbic system associated membrane protein [ Columba livia (rock pigeon) ]

Gene ID: 102095543, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LSAMP
Gene description
limbic system associated membrane protein
Locus tag
A306_00487
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973689.1 (20320053..21328245)

NW_004973689.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110365495 Neighboring gene uncharacterized LOC110365424 Neighboring gene uncharacterized LOC110365423 Neighboring gene uncharacterized LOC110365427 Neighboring gene uncharacterized LOC110365421 Neighboring gene uncharacterized LOC110365418 Neighboring gene uncharacterized LOC110365422 Neighboring gene uncharacterized LOC110365425 Neighboring gene uncharacterized LOC110365419 Neighboring gene uncharacterized LOC110365420 Neighboring gene uncharacterized LOC110365428 Neighboring gene uncharacterized LOC110365426 Neighboring gene uncharacterized LOC110365446 Neighboring gene growth associated protein 43

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004973689 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables axon guidance receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
limbic system-associated membrane protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973689.1 Reference Cliv_1.0 Primary Assembly

    Range
    20320053..21328245
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021299793.1 → XP_021155468.1  limbic system-associated membrane protein isoform X3

    UniProtKB/TrEMBL
    A0A2I0MS62
    Conserved Domains (2) summary
    pfam13927
    Location:215 → 291
    Ig_3; Immunoglobulin domain
    cl11960
    Location:35 → 125
    Ig; Immunoglobulin domain

  2. XM_021299792.1 → XP_021155467.1  limbic system-associated membrane protein isoform X2

    UniProtKB/TrEMBL
    A0A2I0MS62
    Conserved Domains (2) summary
    pfam13927
    Location:238 → 314
    Ig_3; Immunoglobulin domain
    cl11960
    Location:58 → 148
    Ig; Immunoglobulin domain

  3. XM_013370058.2 → XP_013225512.2  limbic system-associated membrane protein isoform X1

    Conserved Domains (2) summary
    pfam13927
    Location:235 → 311
    Ig_3; Immunoglobulin domain
    cl11960
    Location:55 → 145
    Ig; Immunoglobulin domain

  4. XM_021299794.1 → XP_021155469.1  limbic system-associated membrane protein isoform X4

    UniProtKB/TrEMBL
    A0A2I0MS62
    Conserved Domains (2) summary
    pfam13927
    Location:191 → 267
    Ig_3; Immunoglobulin domain
    cl11960
    Location:26 → 101
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.