U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SNAPC3 small nuclear RNA activating complex polypeptide 3 [ Columba livia (rock pigeon) ]

Gene ID: 102095259, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SNAPC3
Gene description
small nuclear RNA activating complex polypeptide 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973289.1 (1108394..1133370, complement)

NW_004973289.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110359424 Neighboring gene uncharacterized LOC110359419 Neighboring gene PC4 and SRSF1 interacting protein 1 Neighboring gene uncharacterized LOC110359420 Neighboring gene tetratricopeptide repeat domain 39B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004973289 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase III type 3 promoter sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables bent DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables core promoter sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in snRNA transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snRNA transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of snRNA-activating protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
snRNA-activating protein complex subunit 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973289.1 Reference Cliv_1.0 Primary Assembly

    Range
    1108394..1133370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021288822.1 → XP_021144497.1  snRNA-activating protein complex subunit 3 isoform X3

    Conserved Domains (1) summary
    pfam12251
    Location:101 → 302
    zf-SNAP50_C; snRNA-activating protein of 50kDa MW C terminal

  2. XM_005503301.2 → XP_005503358.1  snRNA-activating protein complex subunit 3 isoform X2

    See identical proteins and their annotated locations for XP_005503358.1

    UniProtKB/TrEMBL
    A0A2I0MFR7
    Conserved Domains (1) summary
    pfam12251
    Location:107 → 308
    zf-SNAP50_C; snRNA-activating protein of 50kDa MW C terminal

  3. XM_005503302.3 → XP_005503359.2  snRNA-activating protein complex subunit 3 isoform X1

    UniProtKB/TrEMBL
    A0A2I0MFR5
    Conserved Domains (1) summary
    pfam12251
    Location:124 → 325
    zf-SNAP50_C; snRNA-activating protein of 50kDa MW C terminal

  4. XM_005503303.2 → XP_005503360.1  snRNA-activating protein complex subunit 3 isoform X4

    UniProtKB/TrEMBL
    A0A2I0MFT3
    Conserved Domains (1) summary
    pfam12251
    Location:44 → 245
    zf-SNAP50_C; snRNA-activating protein of 50kDa MW C terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.