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CD3D CD3d molecule [ Columba livia (rock pigeon) ]

Gene ID: 102092403, updated on 10-Mar-2024

Summary

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Gene symbol
CD3D
Gene description
CD3d molecule
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973237.1 (998377..1001448, complement)

NW_004973237.1Genomic Context describing neighboring genes Neighboring gene myelin protein zero like 2 Neighboring gene uncharacterized LOC110357571 Neighboring gene CD3e molecule Neighboring gene zw10 kinetochore protein Neighboring gene uncharacterized LOC110357572

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004973237 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive thymic T cell selection IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha-beta T cell receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell surface glycoprotein CD3 delta chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973237.1 Reference Cliv_1.0 Primary Assembly

    Range
    998377..1001448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005500716.2 → XP_005500773.1  T-cell surface glycoprotein CD3 delta chain

    See identical proteins and their annotated locations for XP_005500773.1

    Conserved Domains (2) summary
    pfam02189
    Location:149 → 166
    ITAM; Immunoreceptor tyrosine-based activation motif
    pfam16680
    Location:35 → 103
    Ig_4; T-cell surface glycoprotein CD3 delta chain
Nucleotide Protein
Heading Accession and Version

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