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TFIP11 tuftelin interacting protein 11 [ Columba livia (rock pigeon) ]

Gene ID: 102092148, updated on 10-Mar-2024

Summary

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Gene symbol
TFIP11
Gene description
tuftelin interacting protein 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973182.1 (1558466..1566495)

NW_004973182.1Genomic Context describing neighboring genes Neighboring gene crystallin beta B1 Neighboring gene crystallin beta A4 Neighboring gene tyrosylprotein sulfotransferase 2 Neighboring gene SRR1 domain containing Neighboring gene HPS4 biogenesis of lysosomal organelles complex 3 subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004973182 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spliceosomal complex disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2-type post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tuftelin-interacting protein 11
Names
Tuftelin-interacting protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973182.1 Reference Cliv_1.0 Primary Assembly

    Range
    1558466..1566495
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013366778.2 → XP_013222232.1  tuftelin-interacting protein 11

    UniProtKB/TrEMBL
    A0A2I0M8D9
    Conserved Domains (4) summary
    pfam01585
    Location:145 → 189
    G-patch; G-patch domain
    pfam07842
    Location:387 → 656
    GCFC; GC-rich sequence DNA-binding factor-like protein
    pfam12457
    Location:16 → 100
    TIP_N; Tuftelin interacting protein N terminal
    cl02565
    Location:311 → 409
    RGS; Regulator of G protein signaling (RGS) domain superfamily
Nucleotide Protein
Heading Accession and Version

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