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SKIC3 SKI3 subunit of superkiller complex [ Columba livia (rock pigeon) ]

Gene ID: 102091314, updated on 11-Apr-2024

Summary

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Gene symbol
SKIC3
Gene description
SKI3 subunit of superkiller complex
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Also known as
TTC37
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
42
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973337.1 (3309592..3359046, complement)

NW_004973337.1Genomic Context describing neighboring genes Neighboring gene multiple C2 and transmembrane domain containing 1 Neighboring gene uncharacterized LOC110360569 Neighboring gene family with sequence similarity 81 member B Neighboring gene arylsulfatase family member K Neighboring gene Rieske Fe-S domain containing

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004973337 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ski complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 37
Names
Tetratricopeptide repeat protein 37
tetratricopeptide repeat domain 37

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973337.1 Reference Cliv_1.0 Primary Assembly

    Range
    3309592..3359046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005505009.2 → XP_005505066.1  tetratricopeptide repeat protein 37 isoform X1

    UniProtKB/TrEMBL
    A0A2I0LZD1
    Conserved Domains (4) summary
    sd00006
    Location:565 → 591
    TPR; TPR repeat [structural motif]
    cl26002
    Location:256 → 905
    TPR_11; TPR repeat
    cl27017
    Location:1 → 92
    YfgC; Putative Zn-dependent protease, contains TPR repeats [General function prediction only]
    cl27272
    Location:75 → 215
    GreA_GreB_N; Transcription elongation factor, N-terminal

  2. XM_005505010.2 → XP_005505067.1  tetratricopeptide repeat protein 37 isoform X2

    See identical proteins and their annotated locations for XP_005505067.1

    UniProtKB/TrEMBL
    A0A2I0LZC9
    Conserved Domains (4) summary
    sd00006
    Location:564 → 590
    TPR; TPR repeat [structural motif]
    cl26002
    Location:255 → 904
    TPR_11; TPR repeat
    cl27017
    Location:1 → 92
    YfgC; Putative Zn-dependent protease, contains TPR repeats [General function prediction only]
    cl27272
    Location:75 → 215
    GreA_GreB_N; Transcription elongation factor, N-terminal
Nucleotide Protein
Heading Accession and Version

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