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RYR2 ryanodine receptor 2 [ Columba livia (rock pigeon) ]

Gene ID: 102091036, updated on 10-Mar-2024

Summary

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Gene symbol
RYR2
Gene description
ryanodine receptor 2
Locus tag
A306_05472
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
107
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973497.1 (8529110..8829227)

NW_004973497.1Genomic Context describing neighboring genes Neighboring gene actinin alpha 2 Neighboring gene uncharacterized LOC110363409 Neighboring gene 5-methyltetrahydrofolate-homocysteine methyltransferase Neighboring gene uncharacterized LOC110363403 Neighboring gene uncharacterized LOC110363442 Neighboring gene uncharacterized LOC110363441

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004973497 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ryanodine-sensitive calcium-release channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in smooth endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ryanodine receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973497.1 Reference Cliv_1.0 Primary Assembly

    Range
    8529110..8829227
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021296180.1 → XP_021151855.1  ryanodine receptor 2

    UniProtKB/TrEMBL
    A0A2I0MVC2
    Conserved Domains (12) summary
    cd12877
    Location:645 → 796
    SPRY1_RyR; SPRY domain 1 (SPRY1) of ryanodine receptor (RyR)
    cd12878
    Location:1077 → 1209
    SPRY2_RyR; SPRY domain 2 (SPRY2) of ryanodine receptor (RyR)
    cd12879
    Location:1403 → 1549
    SPRY3_RyR; SPRY domain 3 (SPRY3) of ryanodine receptor (RyR)
    pfam00520
    Location:4724 → 4884
    Ion_trans; Ion transport protein
    pfam01365
    Location:446 → 639
    RYDR_ITPR; RIH domain
    pfam02026
    Location:853 → 941
    RyR; RyR domain
    pfam02815
    Location:217 → 397
    MIR; MIR domain
    pfam06459
    Location:4338 → 4605
    RR_TM4-6; Ryanodine Receptor TM 4-6
    pfam08454
    Location:3840 → 3953
    RIH_assoc; RyR and IP3R Homology associated
    pfam13499
    Location:4035 → 4092
    EF-hand_7; EF-hand domain pair
    pfam14070
    Location:3960 → 4007
    YjfB_motility; Putative motility protein
    cl19745
    Location:8 → 207
    Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor
Nucleotide Protein
Heading Accession and Version

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