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OVCH2 ovochymase 2 [ Columba livia (rock pigeon) ]

Gene ID: 102088414, updated on 10-Mar-2024

Summary

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Gene symbol
OVCH2
Gene description
ovochymase 2
Locus tag
A306_03150
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973198.1 (8394432..8429903)

NW_004973198.1Genomic Context describing neighboring genes Neighboring gene parathyroid hormone Neighboring gene fatty acyl-CoA reductase 1 Neighboring gene uncharacterized LOC110366156 Neighboring gene NADH-cytochrome b5 reductase 2 Neighboring gene PPFIA binding protein 2 Neighboring gene olfactomedin like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004973198 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ovochymase-2
Names
Ovochymase-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973198.1 Reference Cliv_1.0 Primary Assembly

    Range
    8394432..8429903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021301077.1 → XP_021156752.1  ovochymase-2 isoform X1

    Conserved Domains (3) summary
    smart00020
    Location:594 → 828
    Tryp_SPc; Trypsin-like serine protease
    cd00041
    Location:437 → 548
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00190
    Location:53 → 300
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

  2. XM_021301082.1 → XP_021156757.1  ovochymase-2 isoform X1

    Conserved Domains (3) summary
    smart00020
    Location:594 → 828
    Tryp_SPc; Trypsin-like serine protease
    cd00041
    Location:437 → 548
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00190
    Location:53 → 300
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

  3. XM_021301072.1 → XP_021156747.1  ovochymase-2 isoform X1

    Conserved Domains (3) summary
    smart00020
    Location:594 → 828
    Tryp_SPc; Trypsin-like serine protease
    cd00041
    Location:437 → 548
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00190
    Location:53 → 300
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

  4. XM_021301091.1 → XP_021156766.1  ovochymase-2 isoform X2

    Conserved Domains (3) summary
    smart00020
    Location:585 → 819
    Tryp_SPc; Trypsin-like serine protease
    cd00041
    Location:428 → 539
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00190
    Location:53 → 291
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

  5. XM_021301081.1 → XP_021156756.1  ovochymase-2 isoform X1

    Conserved Domains (3) summary
    smart00020
    Location:594 → 828
    Tryp_SPc; Trypsin-like serine protease
    cd00041
    Location:437 → 548
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00190
    Location:53 → 300
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

  6. XM_021301084.1 → XP_021156759.1  ovochymase-2 isoform X1

    Conserved Domains (3) summary
    smart00020
    Location:594 → 828
    Tryp_SPc; Trypsin-like serine protease
    cd00041
    Location:437 → 548
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00190
    Location:53 → 300
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
Nucleotide Protein
Heading Accession and Version

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