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IL16 interleukin 16 [ Columba livia (rock pigeon) ]

Gene ID: 102088285, updated on 10-Mar-2024

Summary

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Gene symbol
IL16
Gene description
interleukin 16
Locus tag
A306_15022
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973997.1 (465700..496119, complement)

NW_004973997.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110355556 Neighboring gene uncharacterized LOC110355557 Neighboring gene transmembrane channel like 3 Neighboring gene uncharacterized LOC110355558 Neighboring gene StAR related lipid transfer domain containing 5 Neighboring gene cilia and flagella associated protein 161 Neighboring gene uncharacterized LOC110355560

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004973997 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CD4 receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in induction of positive chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pro-interleukin-16
Names
Pro-interleukin-16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973997.1 Reference Cliv_1.0 Primary Assembly

    Range
    465700..496119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021281331.1 → XP_021137006.1  pro-interleukin-16

    UniProtKB/TrEMBL
    A0A2I0MD23
    Conserved Domains (2) summary
    smart00228
    Location:1357 → 1445
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:322 → 404
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
Nucleotide Protein
Heading Accession and Version

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