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CHST13 carbohydrate sulfotransferase 13 [ Columba livia (rock pigeon) ]

Gene ID: 102088065, updated on 10-Mar-2024

Summary

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Gene symbol
CHST13
Gene description
carbohydrate sulfotransferase 13
Locus tag
A306_06477
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973446.1 (1412899..1455312)

NW_004973446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110362685 Neighboring gene uncharacterized LOC110362673 Neighboring gene uncharacterized LOC110362672 Neighboring gene uncharacterized LOC110362674 Neighboring gene solute carrier family 41 member 3 Neighboring gene KLF transcription factor 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004973446 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 13
Names
Carbohydrate sulfotransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973446.1 Reference Cliv_1.0 Primary Assembly

    Range
    1412899..1455312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005507530.2 → XP_005507587.1  carbohydrate sulfotransferase 13

    See identical proteins and their annotated locations for XP_005507587.1

    UniProtKB/TrEMBL
    A0A2I0LVN8
    Conserved Domains (1) summary
    pfam03567
    Location:64 → 294
    Sulfotransfer_2; Sulfotransferase family

  2. XM_021294644.1 → XP_021150319.1  carbohydrate sulfotransferase 13

    UniProtKB/TrEMBL
    A0A2I0LVN8
    Conserved Domains (1) summary
    pfam03567
    Location:64 → 294
    Sulfotransfer_2; Sulfotransferase family

  3. XM_013368671.2 → XP_013224125.1  carbohydrate sulfotransferase 13

    UniProtKB/TrEMBL
    A0A2I0LVN8
    Conserved Domains (1) summary
    pfam03567
    Location:64 → 294
    Sulfotransfer_2; Sulfotransferase family

  4. XM_021294645.1 → XP_021150320.1  carbohydrate sulfotransferase 13

    UniProtKB/TrEMBL
    A0A2I0LVN8
    Conserved Domains (1) summary
    pfam03567
    Location:64 → 294
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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