U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CDC42BPB CDC42 binding protein kinase beta [ Columba livia (rock pigeon) ]

Gene ID: 102085036, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CDC42BPB
Gene description
CDC42 binding protein kinase beta
Locus tag
A306_03260
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
37
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973385.1 (2166047..2233669)

NW_004973385.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110361342 Neighboring gene uncharacterized LOC110361296 Neighboring gene amnion associated transmembrane protein Neighboring gene TNF receptor associated factor 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004973385 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-threonine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serine/threonine-protein kinase MRCK beta
Names
Serine/threonine-protein kinase MRCK beta

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973385.1 Reference Cliv_1.0 Primary Assembly

    Range
    2166047..2233669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013368222.2 → XP_013223676.1  serine/threonine-protein kinase MRCK beta isoform X5

    UniProtKB/TrEMBL
    A0A2I0MQ21, A0A2I0MQ23
    Conserved Domains (6) summary
    COG0419
    Location:370 → 866
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd00029
    Location:963 → 1012
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01243
    Location:1022 → 1156
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1182 → 1447
    CNH; CNH domain
    pfam15796
    Location:460 → 538
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:1 → 343
    PKc_like; Protein Kinases, catalytic domain

  2. XM_005506082.2 → XP_005506139.1  serine/threonine-protein kinase MRCK beta isoform X6

    UniProtKB/TrEMBL
    A0A2I0MQ16, A0A2I0MQ23
    Conserved Domains (6) summary
    COG0419
    Location:370 → 866
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd00029
    Location:958 → 1007
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01243
    Location:1017 → 1151
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1177 → 1442
    CNH; CNH domain
    pfam15796
    Location:460 → 538
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:1 → 343
    PKc_like; Protein Kinases, catalytic domain

  3. XM_021292359.1 → XP_021148034.1  serine/threonine-protein kinase MRCK beta isoform X7

    UniProtKB/TrEMBL
    A0A2I0MQ23
    Conserved Domains (7) summary
    smart00285
    Location:1515 → 1542
    PBD; P21-Rho-binding domain
    COG0419
    Location:370 → 866
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd00029
    Location:958 → 1007
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01243
    Location:1017 → 1151
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1177 → 1442
    CNH; CNH domain
    pfam15796
    Location:460 → 538
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:1 → 343
    PKc_like; Protein Kinases, catalytic domain

  4. XM_021292356.1 → XP_021148031.1  serine/threonine-protein kinase MRCK beta isoform X2

    UniProtKB/TrEMBL
    A0A2I0MQ23
    Conserved Domains (7) summary
    smart00285
    Location:1494 → 1521
    PBD; P21-Rho-binding domain
    COG0419
    Location:344 → 840
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd00029
    Location:937 → 986
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01243
    Location:996 → 1130
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1156 → 1421
    CNH; CNH domain
    pfam15796
    Location:434 → 512
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:1 → 317
    PKc_like; Protein Kinases, catalytic domain

  5. XM_021292355.1 → XP_021148030.1  serine/threonine-protein kinase MRCK beta isoform X1

    UniProtKB/TrEMBL
    A0A2I0MQ23
    Conserved Domains (7) summary
    smart00285
    Location:1495 → 1522
    PBD; P21-Rho-binding domain
    COG0419
    Location:344 → 840
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd00029
    Location:937 → 986
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01243
    Location:996 → 1130
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1156 → 1421
    CNH; CNH domain
    pfam15796
    Location:434 → 512
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:1 → 317
    PKc_like; Protein Kinases, catalytic domain

  6. XM_021292358.1 → XP_021148033.1  serine/threonine-protein kinase MRCK beta isoform X4

    UniProtKB/TrEMBL
    A0A2I0MQ23
    Conserved Domains (7) summary
    smart00285
    Location:1465 → 1492
    PBD; P21-Rho-binding domain
    COG0419
    Location:344 → 840
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd00029
    Location:907 → 956
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01243
    Location:966 → 1100
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1126 → 1391
    CNH; CNH domain
    pfam15796
    Location:434 → 512
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:1 → 317
    PKc_like; Protein Kinases, catalytic domain

  7. XM_021292357.1 → XP_021148032.1  serine/threonine-protein kinase MRCK beta isoform X3

    UniProtKB/TrEMBL
    A0A2I0MQ23
    Conserved Domains (7) summary
    smart00285
    Location:1490 → 1517
    PBD; P21-Rho-binding domain
    COG0419
    Location:344 → 840
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd00029
    Location:932 → 981
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01243
    Location:991 → 1125
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1151 → 1416
    CNH; CNH domain
    pfam15796
    Location:434 → 512
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:1 → 317
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.