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CRAT carnitine O-acetyltransferase [ Columba livia (rock pigeon) ]

Gene ID: 102084317, updated on 10-Mar-2024

Summary

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Gene symbol
CRAT
Gene description
carnitine O-acetyltransferase
Locus tag
A306_14998
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Also known as
CAT
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004974009.1 (458593..471077, complement)

NW_004974009.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110355585 Neighboring gene dolichyldiphosphatase 1 Neighboring gene protein phosphatase 2 phosphatase activator Neighboring gene uncharacterized LOC110355590

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004974009 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning, sequencing and heterologous expression of a cDNA encoding pigeon liver carnitine acetyltransferase. Johnson TM, et al. Biochem J, 1995 Jan 15. PMID 7832757, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process, CoA-linked IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-acetyltransferase
Names
Carnitine acetylase
carnitine acetyltransferase
NP_001269768.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001282839.1 → NP_001269768.1  carnitine O-acetyltransferase

    See identical proteins and their annotated locations for NP_001269768.1

    Status: PROVISIONAL

    Source sequence(s)
    U08229
    UniProtKB/Swiss-Prot
    P52826
    UniProtKB/TrEMBL
    A0A2I0M3I5
    Conserved Domains (1) summary
    pfam00755
    Location:36 → 616
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004974009.1 Reference Cliv_1.0 Primary Assembly

    Range
    458593..471077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P52826.1 GenPept UniProtKB/Swiss-Prot:P52826

Gene LinkOut

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