U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LYN LYN proto-oncogene, Src family tyrosine kinase [ Columba livia (rock pigeon) ]

Gene ID: 102084226, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
LYN
Gene description
LYN proto-oncogene, Src family tyrosine kinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973399.1 (4479398..4527635, complement)

NW_004973399.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110361703 Neighboring gene kinesin-like protein KIF20A Neighboring gene ribosomal protein S20 Neighboring gene uncharacterized LOC110361705 Neighboring gene uncharacterized LOC110361706 Neighboring gene trimethylguanosine synthase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004973399 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables non-membrane spanning protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tyrosine-protein kinase Lyn
Names
Tyrosine-protein kinase Lyn
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973399.1 Reference Cliv_1.0 Primary Assembly

    Range
    4479398..4527635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005506499.2 → XP_005506556.1  tyrosine-protein kinase Lyn isoform X2

    See identical proteins and their annotated locations for XP_005506556.1

    UniProtKB/TrEMBL
    A0A2I0MVY9
    Conserved Domains (3) summary
    cd10364
    Location:126 → 226
    SH2_Src_Lyn; Src homology 2 (SH2) domain found in Lyn
    cd12004
    Location:68 → 123
    SH3_Lyn; Src homology 3 domain of Lyn Protein Tyrosine Kinase
    cd05072
    Location:240 → 511
    PTKc_Lyn; Catalytic domain of the Protein Tyrosine Kinase, Lyn

  2. XM_021292979.1 → XP_021148654.1  tyrosine-protein kinase Lyn isoform X2

    UniProtKB/TrEMBL
    A0A2I0MVY9
    Conserved Domains (3) summary
    cd10364
    Location:126 → 226
    SH2_Src_Lyn; Src homology 2 (SH2) domain found in Lyn
    cd12004
    Location:68 → 123
    SH3_Lyn; Src homology 3 domain of Lyn Protein Tyrosine Kinase
    cd05072
    Location:240 → 511
    PTKc_Lyn; Catalytic domain of the Protein Tyrosine Kinase, Lyn

  3. XM_021292978.1 → XP_021148653.1  tyrosine-protein kinase Lyn isoform X1

    UniProtKB/TrEMBL
    A0A2I0MVY8
    Conserved Domains (3) summary
    cd10364
    Location:105 → 205
    SH2_Src_Lyn; Src homology 2 (SH2) domain found in Lyn
    cd12004
    Location:47 → 102
    SH3_Lyn; Src homology 3 domain of Lyn Protein Tyrosine Kinase
    cd05072
    Location:219 → 490
    PTKc_Lyn; Catalytic domain of the Protein Tyrosine Kinase, Lyn
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.