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AGGF1 angiogenic factor with G-patch and FHA domains 1 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102072478, updated on 10-Mar-2024

Summary

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Gene symbol
AGGF1
Gene description
angiogenic factor with G-patch and FHA domains 1
See related
Ensembl:ENSZALG00000016565
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081599.1 (3910663..3932967)

NW_005081599.1Genomic Context describing neighboring genes Neighboring gene S100 calcium binding protein Z Neighboring gene corticotropin releasing hormone binding protein Neighboring gene small nucleolar RNA SNORA47 Neighboring gene phosphodiesterase 8B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081599 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
angiogenic factor with G patch and FHA domains 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081599.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    3910663..3932967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026794326.1 → XP_026650127.1  angiogenic factor with G patch and FHA domains 1 isoform X3

    Conserved Domains (3) summary
    cd00060
    Location:314 → 420
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd16164
    Location:191 → 244
    OCRE_VG5Q; OCRE domain found in angiogenic factor VG5Q and similar proteins
    cl02611
    Location:521 → 565
    G-patch; G-patch domain

  2. XM_014268000.2 → XP_014123475.1  angiogenic factor with G patch and FHA domains 1 isoform X1

    Conserved Domains (4) summary
    COG1716
    Location:425 → 510
    FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
    cd00060
    Location:408 → 514
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd16164
    Location:191 → 244
    OCRE_VG5Q; OCRE domain found in angiogenic factor VG5Q and similar proteins
    cl02611
    Location:615 → 659
    G-patch; G-patch domain

  3. XM_014268001.2 → XP_014123476.1  angiogenic factor with G patch and FHA domains 1 isoform X2

    UniProtKB/TrEMBL
    A0A8D2QJW3
    Related
    ENSZALP00000021126.1, ENSZALT00000027598.1
    Conserved Domains (4) summary
    COG1716
    Location:388 → 473
    FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
    cd00060
    Location:371 → 477
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd16164
    Location:154 → 207
    OCRE_VG5Q; OCRE domain found in angiogenic factor VG5Q and similar proteins
    cl02611
    Location:578 → 622
    G-patch; G-patch domain
Nucleotide Protein
Heading Accession and Version

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