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RBM19 RNA binding motif protein 19 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102072087, updated on 10-Mar-2024

Summary

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Gene symbol
RBM19
Gene description
RNA binding motif protein 19
See related
Ensembl:ENSZALG00000003139
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081733.1 (831601..884651)

NW_005081733.1Genomic Context describing neighboring genes Neighboring gene T-box transcription factor 3 Neighboring gene T-box transcription factor 5 Neighboring gene uncharacterized LOC113460096

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081733 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable RNA-binding protein 19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081733.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    831601..884651
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005493702.3 → XP_005493759.1  probable RNA-binding protein 19 isoform X1

    UniProtKB/TrEMBL
    A0A8D2M684
    Related
    ENSZALP00000003071.1, ENSZALT00000004975.1
    Conserved Domains (9) summary
    COG0724
    Location:2 → 87
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12318
    Location:714 → 793
    RRM5_RBM19_like; RNA recognition motif 5 in RNA-binding protein 19 (RBM19 or RBD-1) and similar proteins
    cd12564
    Location:2 → 77
    RRM1_RBM19; RNA recognition motif 1 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12567
    Location:401 → 479
    RRM3_RBM19; RNA recognition motif 3 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12569
    Location:588 → 659
    RRM4_RBM19; RNA recognition motif 4 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12571
    Location:816 → 894
    RRM6_RBM19; RNA recognition motif 6 in RNA-binding protein 19 (RBM19) and similar proteins
    TIGR01661
    Location:405 → 790
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    pfam16651
    Location:82 → 221
    RRM_u2; Unstructured region on RNA-binding-domain protein
    cl17169
    Location:296 → 367
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_026797248.1 → XP_026653049.1  probable RNA-binding protein 19 isoform X2

    Conserved Domains (7) summary
    COG0724
    Location:476 → 778
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12318
    Location:712 → 791
    RRM5_RBM19_like; RNA recognition motif 5 in RNA-binding protein 19 (RBM19 or RBD-1) and similar proteins
    cd12564
    Location:2 → 77
    RRM1_RBM19; RNA recognition motif 1 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12567
    Location:399 → 477
    RRM3_RBM19; RNA recognition motif 3 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12569
    Location:586 → 657
    RRM4_RBM19; RNA recognition motif 4 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12571
    Location:814 → 892
    RRM6_RBM19; RNA recognition motif 6 in RNA-binding protein 19 (RBM19) and similar proteins
    cl17169
    Location:294 → 365
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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