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PACSIN1 protein kinase C and casein kinase substrate in neurons 1 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102063610, updated on 10-Mar-2024

Summary

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Gene symbol
PACSIN1
Gene description
protein kinase C and casein kinase substrate in neurons 1
See related
Ensembl:ENSZALG00000009880
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081703.1 (624086..628992)

NW_005081703.1Genomic Context describing neighboring genes Neighboring gene diphosphoinositol polyphosphate phosphohydrolase 1 Neighboring gene uncharacterized LOC106629719 Neighboring gene SAM pointed domain containing ETS transcription factor Neighboring gene inflammation and lipid regulator with UBA-like and NBR1-like domains

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081703 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane tubulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of dendrite development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein kinase C and casein kinase substrate in neurons protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081703.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    624086..628992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005492786.3 → XP_005492843.1  protein kinase C and casein kinase substrate in neurons protein 1

    UniProtKB/TrEMBL
    A0A8D2QEX0
    Related
    ENSZALP00000011719.1, ENSZALT00000016175.1
    Conserved Domains (2) summary
    cd07680
    Location:19 → 276
    F-BAR_PACSIN1; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1)
    cd11998
    Location:389 → 444
    SH3_PACSIN1-2; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN 2
Nucleotide Protein
Heading Accession and Version

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