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THOP1 thimet oligopeptidase 1 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102062983, updated on 10-Mar-2024

Summary

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Gene symbol
THOP1
Gene description
thimet oligopeptidase 1
See related
Ensembl:ENSZALG00000000526
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passerellidae; Zonotrichia
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005082184.1 (43848..50576)

NW_005082184.1Genomic Context describing neighboring genes Neighboring gene small glutamine rich tetratricopeptide repeat co-chaperone alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005082184 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thimet oligopeptidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005082184.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    43848..50576
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014274518.2 → XP_014129993.1  thimet oligopeptidase

    UniProtKB/TrEMBL
    A0A8D2M2I6
    Related
    ENSZALP00000000999.1, ENSZALT00000001874.1
    Conserved Domains (2) summary
    cd06455
    Location:31 → 672
    M3A_TOP; Peptidase M3 Thimet oligopeptidase (TOP) also includes neurolysin
    COG0339
    Location:28 → 676
    Dcp; Zn-dependent oligopeptidase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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