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FTO FTO alpha-ketoglutarate dependent dioxygenase [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102061554, updated on 11-Apr-2024

Summary

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Gene symbol
FTO
Gene description
FTO alpha-ketoglutarate dependent dioxygenase
See related
Ensembl:ENSZALG00000009199
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081605.1 (2572239..2765387)

NW_005081605.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113459489 Neighboring gene RPGRIP1 like Neighboring gene uncharacterized LOC113459497 Neighboring gene uncharacterized LOC113459488

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081605 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables broad specificity oxidative DNA demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA N6-methyladenosine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA alkylation repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in RNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of multicellular organism growth IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-ketoglutarate-dependent dioxygenase FTO

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081605.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    2572239..2765387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026794658.1 → XP_026650459.1  alpha-ketoglutarate-dependent dioxygenase FTO

    UniProtKB/TrEMBL
    A0A8D2MRM5, A0A8D2QEI8
    Related
    ENSZALP00000010911.1, ENSZALT00000015070.1
    Conserved Domains (2) summary
    pfam12933
    Location:1 → 272
    FTO_NTD; FTO catalytic domain
    pfam12934
    Location:276 → 446
    FTO_CTD; FTO C-terminal domain
Nucleotide Protein
Heading Accession and Version

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