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VMP1 vacuole membrane protein 1 [ Falco cherrug (Saker falcon) ]

Gene ID: 102058259, updated on 10-Mar-2024

Summary

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Gene symbol
VMP1
Gene description
vacuole membrane protein 1
See related
EnsemblRapid:ENSFCHG00000012526
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco cherrug
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalChe1.pri (GCF_023634085.1) 1 NC_073697.1 (110252694..110323538)
102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994735.1 (3701629..3768681, complement)

Chromosome 1 - NC_073697.1Genomic Context describing neighboring genes Neighboring gene DEAH-box helicase 40 Neighboring gene uncharacterized LOC129736712 Neighboring gene clathrin heavy chain Neighboring gene proline-rich protein 2-like Neighboring gene peptidyl-tRNA hydrolase 2 Neighboring gene tubulin delta 1 Neighboring gene ribosomal protein S6 kinase B1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuole membrane protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalChe1.pri Primary Assembly

Genomic

  1. NC_073697.1 Reference bFalChe1.pri Primary Assembly

    Range
    110252694..110323538
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055719427.1 → XP_055575402.1  vacuole membrane protein 1 isoform X1

  2. XM_055719422.1 → XP_055575397.1  vacuole membrane protein 1 isoform X1

  3. XM_005439718.4 → XP_005439775.1  vacuole membrane protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005439775.1

    Related
    ENSFCHP00000020306.1
    Conserved Domains (1) summary
    cl00429
    Location:246 → 297
    SNARE_assoc; SNARE associated Golgi protein

  4. XM_027806376.2 → XP_027662177.1  vacuole membrane protein 1 isoform X1

    Conserved Domains (1) summary
    cl00429
    Location:246 → 297
    SNARE_assoc; SNARE associated Golgi protein

  5. XM_027806378.2 → XP_027662179.1  vacuole membrane protein 1 isoform X2

    Conserved Domains (1) summary
    cl00429
    Location:200 → 251
    SNARE_assoc; SNARE associated Golgi protein
Nucleotide Protein
Heading Accession and Version

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