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LOC102057264 vacuolar protein-sorting-associated protein 36 [ Falco cherrug (Saker falcon) ]

Gene ID: 102057264, updated on 9-Nov-2023

Summary

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Gene symbol
LOC102057264
Gene description
vacuolar protein-sorting-associated protein 36
See related
EnsemblRapid:ENSFCHG00000011199
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco cherrug
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco
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Genomic context

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Location:
chromosome: W
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalChe1.pri (GCF_023634085.1) W Unlocalized Scaffold NW_026599288.1 (12757481..12780607, complement)
102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994973.1 (1860796..1880681)

NW_026599288.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129734932 Neighboring gene thrombospondin type-1 domain-containing protein 1-like Neighboring gene cytoskeleton-associated protein 2-like Neighboring gene serine/threonine-protein kinase Nek3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: vacuolar protein-sorting-associated protein 36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalChe1.pri Primary Assembly

Genomic

  1. NW_026599288.1 Reference bFalChe1.pri Primary Assembly

    Range
    12757481..12780607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055700266.1 → XP_055556241.1  LOW QUALITY PROTEIN: vacuolar protein-sorting-associated protein 36

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases