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PTPN3 protein tyrosine phosphatase non-receptor type 3 [ Falco cherrug (Saker falcon) ]

Gene ID: 102046384, updated on 10-Mar-2024

Summary

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Gene symbol
PTPN3
Gene description
protein tyrosine phosphatase non-receptor type 3
See related
EnsemblRapid:ENSFCHG00000011655
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco cherrug
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalChe1.pri (GCF_023634085.1) 3 NC_073699.1 (76767911..76900538)
102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994862.1 (1448153..1554815)

Chromosome 3 - NC_073699.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114017141 Neighboring gene molybdenum cofactor sulfurase Neighboring gene erythrocyte membrane protein band 4.1 like 4B Neighboring gene ferric chelate reductase 1 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalChe1.pri Primary Assembly

Genomic

  1. NC_073699.1 Reference bFalChe1.pri Primary Assembly

    Range
    76767911..76900538
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055705144.1 → XP_055561119.1  tyrosine-protein phosphatase non-receptor type 3 isoform X1

  2. XM_055705145.1 → XP_055561120.1  tyrosine-protein phosphatase non-receptor type 3 isoform X2

  3. XM_027812005.2 → XP_027667806.1  tyrosine-protein phosphatase non-receptor type 3 isoform X3

    Conserved Domains (4) summary
    cd00992
    Location:377 → 464
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd13189
    Location:73 → 166
    FERM_C_PTPN4_PTPN3_like; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor proteins 3 and 4 (PTPN4 and PTPN3)
    cd14600
    Location:502 → 775
    PTPc-N3; catalytic domain of tyrosine-protein phosphatase non-receptor type 3
    pfam00373
    Location:8 → 79
    FERM_M; FERM central domain

  4. XM_055705147.1 → XP_055561122.1  tyrosine-protein phosphatase non-receptor type 3 isoform X4

Nucleotide Protein
Heading Accession and Version

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