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TXNDC11 thioredoxin domain containing 11 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102040834, updated on 10-Mar-2024

Summary

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Gene symbol
TXNDC11
Gene description
thioredoxin domain containing 11
See related
Ensembl:ENSGFOG00000004683
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054319.1 (7023822..7046876)

NW_005054319.1Genomic Context describing neighboring genes Neighboring gene phospholipase A2 Neighboring gene zinc finger CCCH-type containing 7A Neighboring gene stannin Neighboring gene uncharacterized LOC102040547 Neighboring gene lipopolysaccharide induced TNF factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054319 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
thioredoxin domain-containing protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054319.1 Reference GeoFor_1.0

    Range
    7023822..7046876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031056594.1 → XP_030912454.1  thioredoxin domain-containing protein 11 isoform X1

    UniProtKB/TrEMBL
    A0A8N5EI29
    Related
    ENSGFOP00000006776.1, ENSGFOT00000006992.1
    Conserved Domains (5) summary
    COG1196
    Location:689 → 813
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd02981
    Location:128 → 232
    PDI_b_family; Protein Disulfide Isomerase (PDIb) family, redox inactive TRX-like domain b; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family ...
    cd02995
    Location:570 → 674
    PDI_a_PDI_a'_C; PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein ...
    cd03006
    Location:6 → 118
    PDI_a_EFP1_N; PDIa family, N-terminal EFP1 subfamily; EFP1 is a binding partner protein of thyroid oxidase (ThOX), also called Duox. ThOX proteins are responsible for the generation of hydrogen peroxide, a crucial substrate of thyroperoxidase, which functions to ...
    PTZ00102
    Location:480 → 648
    PTZ00102; disulphide isomerase; Provisional

  2. XM_031056595.1 → XP_030912455.1  thioredoxin domain-containing protein 11 isoform X2

    UniProtKB/TrEMBL
    A0A8N5HXM3
    Conserved Domains (3) summary
    COG1196
    Location:565 → 728
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd02995
    Location:447 → 551
    PDI_a_PDI_a'_C; PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein ...
    PTZ00102
    Location:357 → 525
    PTZ00102; disulphide isomerase; Provisional
Nucleotide Protein
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