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MAN1C1 mannosidase alpha class 1C member 1 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102039998, updated on 10-Mar-2024

Summary

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Gene symbol
MAN1C1
Gene description
mannosidase alpha class 1C member 1
See related
Ensembl:ENSGFOG00000007691
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054436.1 (761690..811535, complement)

NW_005054436.1Genomic Context describing neighboring genes Neighboring gene mitochondrial fission regulator 1 like Neighboring gene selenoprotein N Neighboring gene low density lipoprotein receptor adaptor protein 1 Neighboring gene macoilin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054436 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannosyl-oligosaccharide 1,2-alpha-mannosidase IC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054436.1 Reference GeoFor_1.0

    Range
    761690..811535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031062078.1 → XP_030917938.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IC isoform X1

    UniProtKB/TrEMBL
    A0A8N5EVC5
    Related
    ENSGFOP00000011083.1, ENSGFOT00000011453.1
    Conserved Domains (1) summary
    pfam01532
    Location:6 → 444
    Glyco_hydro_47; Glycosyl hydrolase family 47

  2. XM_005427094.3 → XP_005427151.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IC isoform X2

    UniProtKB/TrEMBL
    A0A6I9HQC7
    Conserved Domains (1) summary
    pfam01532
    Location:1 → 439
    Glyco_hydro_47; Glycosyl hydrolase family 47
Nucleotide Protein
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