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LRIG2 leucine rich repeats and immunoglobulin like domains 2 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102037750, updated on 10-Mar-2024

Summary

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Gene symbol
LRIG2
Gene description
leucine rich repeats and immunoglobulin like domains 2
See related
Ensembl:ENSGFOG00000013375
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See LRIG2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054566.1 (566860..588891)

NW_005054566.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 1 Neighboring gene uncharacterized LOC115948856 Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054566 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeats and immunoglobulin-like domains protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054566.1 Reference GeoFor_1.0

    Range
    566860..588891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005429676.2 → XP_005429733.1  leucine-rich repeats and immunoglobulin-like domains protein 2

    Related
    ENSGFOP00000019938.1, ENSGFOT00000020580.1
    Conserved Domains (6) summary
    cd05763
    Location:516 → 590
    Ig_1; Subgroup of the immunoglobulin (Ig) superfamily
    smart00082
    Location:342 → 390
    LRRCT; Leucine rich repeat C-terminal domain
    COG4886
    Location:14 → 361
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:43 → 65
    LRR_RI; leucine-rich repeat [structural motif]
    pfam07679
    Location:593 → 680
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:401 → 495
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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