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Flrt2 fibronectin leucine rich transmembrane protein 2 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102029008, updated on 10-Mar-2024

Summary

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Gene symbol
Flrt2
Gene description
fibronectin leucine rich transmembrane protein 2
See related
Ensembl:ENSCLAG00000017312
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955438.1 (8565319..8656195)

NW_004955438.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106149174 Neighboring gene uncharacterized LOC102028577 Neighboring gene uncharacterized LOC102028800 Neighboring gene polyadenylate-binding protein-interacting protein 1 pseudogene Neighboring gene uncharacterized LOC106149152

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955438.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat transmembrane protein FLRT2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955438.1 Reference ChiLan1.0 Primary Assembly

    Range
    8565319..8656195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005390244.2 → XP_005390301.1  leucine-rich repeat transmembrane protein FLRT2

    See identical proteins and their annotated locations for XP_005390301.1

    UniProtKB/TrEMBL
    A0A8C2YUY4
    Conserved Domains (7) summary
    smart00013
    Location:35 → 66
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:310 → 361
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:110 → 289
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:65 → 86
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:90 → 110
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:426 → 494
    fn3; Fibronectin type III domain
    pfam13855
    Location:252 → 311
    LRR_8; Leucine rich repeat

  2. XM_013517213.1 → XP_013372667.1  leucine-rich repeat transmembrane protein FLRT2

    UniProtKB/TrEMBL
    A0A8C2YUY4
    Related
    ENSCLAP00000025208.1, ENSCLAT00000025454.1
    Conserved Domains (7) summary
    smart00013
    Location:35 → 66
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:310 → 361
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:110 → 289
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:65 → 86
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:90 → 110
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:426 → 494
    fn3; Fibronectin type III domain
    pfam13855
    Location:252 → 311
    LRR_8; Leucine rich repeat

  3. XM_005390246.2 → XP_005390303.1  leucine-rich repeat transmembrane protein FLRT2

    See identical proteins and their annotated locations for XP_005390303.1

    UniProtKB/TrEMBL
    A0A8C2YUY4
    Conserved Domains (7) summary
    smart00013
    Location:35 → 66
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:310 → 361
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:110 → 289
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:65 → 86
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:90 → 110
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:426 → 494
    fn3; Fibronectin type III domain
    pfam13855
    Location:252 → 311
    LRR_8; Leucine rich repeat

  4. XM_013517212.1 → XP_013372666.1  leucine-rich repeat transmembrane protein FLRT2

    UniProtKB/TrEMBL
    A0A8C2YUY4
    Conserved Domains (7) summary
    smart00013
    Location:35 → 66
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:310 → 361
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:110 → 289
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:65 → 86
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:90 → 110
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:426 → 494
    fn3; Fibronectin type III domain
    pfam13855
    Location:252 → 311
    LRR_8; Leucine rich repeat

  5. XM_005390243.2 → XP_005390300.1  leucine-rich repeat transmembrane protein FLRT2

    See identical proteins and their annotated locations for XP_005390300.1

    UniProtKB/TrEMBL
    A0A8C2YUY4
    Conserved Domains (7) summary
    smart00013
    Location:35 → 66
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:310 → 361
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:110 → 289
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:65 → 86
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:90 → 110
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:426 → 494
    fn3; Fibronectin type III domain
    pfam13855
    Location:252 → 311
    LRR_8; Leucine rich repeat

  6. XM_005390242.2 → XP_005390299.1  leucine-rich repeat transmembrane protein FLRT2

    See identical proteins and their annotated locations for XP_005390299.1

    UniProtKB/TrEMBL
    A0A8C2YUY4
    Conserved Domains (7) summary
    smart00013
    Location:35 → 66
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:310 → 361
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:110 → 289
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:65 → 86
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:90 → 110
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:426 → 494
    fn3; Fibronectin type III domain
    pfam13855
    Location:252 → 311
    LRR_8; Leucine rich repeat

  7. XM_013517211.1 → XP_013372665.1  leucine-rich repeat transmembrane protein FLRT2

    UniProtKB/TrEMBL
    A0A8C2YUY4
    Conserved Domains (7) summary
    smart00013
    Location:35 → 66
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:310 → 361
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:110 → 289
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:65 → 86
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:90 → 110
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:426 → 494
    fn3; Fibronectin type III domain
    pfam13855
    Location:252 → 311
    LRR_8; Leucine rich repeat

  8. XM_013517210.1 → XP_013372664.1  leucine-rich repeat transmembrane protein FLRT2

    UniProtKB/TrEMBL
    A0A8C2YUY4
    Conserved Domains (7) summary
    smart00013
    Location:35 → 66
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:310 → 361
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:110 → 289
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:65 → 86
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:90 → 110
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:426 → 494
    fn3; Fibronectin type III domain
    pfam13855
    Location:252 → 311
    LRR_8; Leucine rich repeat
Nucleotide Protein
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