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Abcc5 ATP binding cassette subfamily C member 5 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102027859, updated on 10-Mar-2024

Summary

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Gene symbol
Abcc5
Gene description
ATP binding cassette subfamily C member 5
See related
Ensembl:ENSCLAG00000014609
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955420.1 (23447920..23522732)

NW_004955420.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine receptor 3C Neighboring gene high mobility group protein B2 pseudogene Neighboring gene uncharacterized LOC102003349 Neighboring gene cytochrome P450 2J2-like Neighboring gene presenilin associated rhomboid like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955420.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multidrug resistance-associated protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955420.1 Reference ChiLan1.0 Primary Assembly

    Range
    23447920..23522732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005383351.2 → XP_005383408.1  multidrug resistance-associated protein 5 isoform X1

    See identical proteins and their annotated locations for XP_005383408.1

    UniProtKB/TrEMBL
    A0A8C2W3C2, A0A8C2YT41
    Related
    ENSCLAP00000021330.1, ENSCLAT00000021532.1
    Conserved Domains (4) summary
    cd03244
    Location:1191 → 1411
    ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
    cd03250
    Location:577 → 759
    ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
    TIGR01271
    Location:100 → 1430
    CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
    cl00549
    Location:863 → 1143
    ABC_membrane; ABC transporter transmembrane region

  2. XM_005383353.2 → XP_005383410.1  multidrug resistance-associated protein 5 isoform X2

    See identical proteins and their annotated locations for XP_005383410.1

    UniProtKB/TrEMBL
    A0A8C2VVS6
    Related
    ENSCLAP00000021331.1, ENSCLAT00000021533.1
    Conserved Domains (1) summary
    PLN03232
    Location:100 → 156
    PLN03232; ABC transporter C family member; Provisional

  3. XM_013513528.1 → XP_013368982.1  multidrug resistance-associated protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A8C2VVS6
    Conserved Domains (1) summary
    PLN03232
    Location:100 → 156
    PLN03232; ABC transporter C family member; Provisional

  4. XM_005383354.2 → XP_005383411.1  multidrug resistance-associated protein 5 isoform X2

    See identical proteins and their annotated locations for XP_005383411.1

    UniProtKB/TrEMBL
    A0A8C2VVS6
    Conserved Domains (1) summary
    PLN03232
    Location:100 → 156
    PLN03232; ABC transporter C family member; Provisional

  5. XM_005383352.2 → XP_005383409.1  multidrug resistance-associated protein 5 isoform X1

    See identical proteins and their annotated locations for XP_005383409.1

    UniProtKB/TrEMBL
    A0A8C2W3C2, A0A8C2YT41
    Related
    ENSCLAP00000021332.1, ENSCLAT00000021534.1
    Conserved Domains (4) summary
    cd03244
    Location:1191 → 1411
    ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
    cd03250
    Location:577 → 759
    ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
    TIGR01271
    Location:100 → 1430
    CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
    cl00549
    Location:863 → 1143
    ABC_membrane; ABC transporter transmembrane region
Nucleotide Protein
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