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Gpbp1l1 GC-rich promoter binding protein 1 like 1 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102025987, updated on 10-Mar-2024

Summary

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Gene symbol
Gpbp1l1
Gene description
GC-rich promoter binding protein 1 like 1
See related
Ensembl:ENSCLAG00000004389
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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See Gpbp1l1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955464.1 (12601373..12659687)

NW_004955464.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-like protein FUBI pseudogene Neighboring gene uncharacterized LOC106150082 Neighboring gene intracisternal A particle-promoted polypeptide Neighboring gene transmembrane protein 69 Neighboring gene coiled-coil domain containing 17 Neighboring gene nuclear autoantigenic sperm protein Neighboring gene uncharacterized LOC106150101 Neighboring gene aldo-keto reductase family 1 member A1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955464.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vasculin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955464.1 Reference ChiLan1.0 Primary Assembly

    Range
    12601373..12659687
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013521584.1 → XP_013377038.1  vasculin-like protein 1

    UniProtKB/TrEMBL
    A0A8C2V035
    Conserved Domains (1) summary
    pfam15337
    Location:380 → 471
    Vasculin; Vascular protein family Vasculin-like 1

  2. XM_005398693.2 → XP_005398750.1  vasculin-like protein 1

    UniProtKB/TrEMBL
    A0A8C2V035
    Related
    ENSCLAP00000006198.1, ENSCLAT00000006301.1
    Conserved Domains (1) summary
    pfam15337
    Location:380 → 471
    Vasculin; Vascular protein family Vasculin-like 1

  3. XM_013521585.1 → XP_013377039.1  vasculin-like protein 1

    UniProtKB/TrEMBL
    A0A8C2V035
    Conserved Domains (1) summary
    pfam15337
    Location:380 → 471
    Vasculin; Vascular protein family Vasculin-like 1
Nucleotide Protein
Heading Accession and Version

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