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Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102024128, updated on 10-Mar-2024

Summary

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Gene symbol
Dnajc6
Gene description
DnaJ heat shock protein family (Hsp40) member C6
See related
Ensembl:ENSCLAG00000008413
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955423.1 (25269459..25382664, complement)

NW_004955423.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102023276 Neighboring gene leptin receptor overlapping transcript Neighboring gene uncharacterized LOC106148548 Neighboring gene adenylate kinase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955423.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in clathrin-dependent endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle uncoating IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative tyrosine-protein phosphatase auxilin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955423.1 Reference ChiLan1.0 Primary Assembly

    Range
    25269459..25382664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005385302.2 → XP_005385359.1  putative tyrosine-protein phosphatase auxilin isoform X1

    UniProtKB/TrEMBL
    A0A8C2VFL8
    Conserved Domains (2) summary
    cd06257
    Location:888 → 933
    DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
    pfam10409
    Location:254 → 392
    PTEN_C2; C2 domain of PTEN tumour-suppressor protein

  2. XM_013514470.1 → XP_013369924.1  putative tyrosine-protein phosphatase auxilin isoform X2

    UniProtKB/TrEMBL
    A0A8C2VFL8
    Related
    ENSCLAP00000012198.1, ENSCLAT00000012340.1
    Conserved Domains (3) summary
    cd06257
    Location:847 → 892
    DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
    pfam01611
    Location:648 → 748
    Filo_glycop; Filovirus glycoprotein
    pfam10409
    Location:213 → 351
    PTEN_C2; C2 domain of PTEN tumour-suppressor protein

  3. XM_005385303.1 → XP_005385360.1  putative tyrosine-protein phosphatase auxilin isoform X2

    UniProtKB/TrEMBL
    A0A8C2VFL8
    Related
    ENSCLAP00000012199.1, ENSCLAT00000012341.1
    Conserved Domains (3) summary
    cd06257
    Location:847 → 892
    DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
    pfam01611
    Location:648 → 748
    Filo_glycop; Filovirus glycoprotein
    pfam10409
    Location:213 → 351
    PTEN_C2; C2 domain of PTEN tumour-suppressor protein
Nucleotide Protein
Heading Accession and Version

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