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Ubr3 ubiquitin protein ligase E3 component n-recognin 3 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102023760, updated on 10-Mar-2024

Summary

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Gene symbol
Ubr3
Gene description
ubiquitin protein ligase E3 component n-recognin 3
See related
Ensembl:ENSCLAG00000008185
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
40
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955449.1 (4583114..4773474, complement)

NW_004955449.1Genomic Context describing neighboring genes Neighboring gene Sp5 transcription factor Neighboring gene myosin IIIB Neighboring gene methyltransferase 5, N6-adenosine Neighboring gene small RNA binding exonuclease protection factor La Neighboring gene kelch like family member 23

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955449.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process via the N-end rule pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase UBR3
Names
ubiquitin protein ligase E3 component n-recognin 3 (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955449.1 Reference ChiLan1.0 Primary Assembly

    Range
    4583114..4773474 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013518691.1 → XP_013374145.1  E3 ubiquitin-protein ligase UBR3

    UniProtKB/TrEMBL
    A0A8C2VFA6
    Related
    ENSCLAP00000011871.1, ENSCLAT00000012010.1
    Conserved Domains (1) summary
    pfam02207
    Location:83 → 150
    zf-UBR; Putative zinc finger in N-recognin (UBR box)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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