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Trappc12 trafficking protein particle complex subunit 12 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102019177, updated on 10-Mar-2024

Summary

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Gene symbol
Trappc12
Gene description
trafficking protein particle complex subunit 12
See related
Ensembl:ENSCLAG00000002486
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955487.1 (3824872..3863859, complement)

NW_004955487.1Genomic Context describing neighboring genes Neighboring gene ribonuclease H1 Neighboring gene acireductone dioxygenase 1 Neighboring gene EARP complex and GARP complex interacting protein 1 Neighboring gene elongation factor 1-alpha 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955487.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of TRAPP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 12
Names
trafficking protein particle complex 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955487.1 Reference ChiLan1.0 Primary Assembly

    Range
    3824872..3863859 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005404378.2 → XP_005404435.1  trafficking protein particle complex subunit 12

    UniProtKB/TrEMBL
    A0A8C2YJM1
    Related
    ENSCLAP00000003479.1, ENSCLAT00000003550.1
    Conserved Domains (4) summary
    sd00006
    Location:641 → 668
    TPR; TPR repeat [structural motif]
    pfam07719
    Location:717 → 747
    TPR_2; Tetratricopeptide repeat
    pfam13414
    Location:717 → 780
    TPR_11; TPR repeat
    pfam13424
    Location:676 → 746
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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