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Ap2b1 adaptor related protein complex 2 subunit beta 1 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102017016, updated on 10-Mar-2024

Summary

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Gene symbol
Ap2b1
Gene description
adaptor related protein complex 2 subunit beta 1
See related
Ensembl:ENSCLAG00000009660
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955481.1 (10061021..10175070)

NW_004955481.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102016160 Neighboring gene uncharacterized LOC102016383 Neighboring gene peroxisomal biogenesis factor 12 Neighboring gene RAS like family 10 member B Neighboring gene growth arrest specific 2 like 2 Neighboring gene chromosome unknown C17orf50 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955481.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-2 complex subunit beta
Names
adaptor related protein complex 2 beta 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955481.1 Reference ChiLan1.0 Primary Assembly

    Range
    10061021..10175070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005402877.2 → XP_005402934.1  AP-2 complex subunit beta isoform X1

    See identical proteins and their annotated locations for XP_005402934.1

    UniProtKB/TrEMBL
    A0A8C2VKG4
    Conserved Domains (5) summary
    smart00809
    Location:731 → 831
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:840 → 950
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    pfam01602
    Location:11 → 534
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:99 → 268
    Cnd1; non-SMC mitotic condensation complex subunit 1
    sd00044
    Location:51 → 75
    HEAT; HEAT repeat [structural motif]

  2. XM_005402876.2 → XP_005402933.1  AP-2 complex subunit beta isoform X1

    See identical proteins and their annotated locations for XP_005402933.1

    UniProtKB/TrEMBL
    A0A8C2VKG4
    Related
    ENSCLAP00000013960.1, ENSCLAT00000014117.1
    Conserved Domains (5) summary
    smart00809
    Location:731 → 831
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:840 → 950
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    pfam01602
    Location:11 → 534
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:99 → 268
    Cnd1; non-SMC mitotic condensation complex subunit 1
    sd00044
    Location:51 → 75
    HEAT; HEAT repeat [structural motif]

  3. XM_005402881.2 → XP_005402938.1  AP-2 complex subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A8C2VF38
    Related
    ENSCLAP00000013961.1, ENSCLAT00000014118.1
    Conserved Domains (5) summary
    smart00809
    Location:717 → 817
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:826 → 936
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    pfam01602
    Location:11 → 534
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:99 → 268
    Cnd1; non-SMC mitotic condensation complex subunit 1
    sd00044
    Location:51 → 75
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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